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Research in computational molecular biology 17th Annual International Conference, RECOMB 2013, Beijing, China, April 7-10, 2013. Proceedings /

Bibliographic Details
Corporate Authors: International Conference on Research in Computational Molecular Biology Beijing, China), SpringerLink (Online service)
Other Authors: Deng, Minghua.
Format: Online Conference Proceeding Book
Published: Berlin ; New York : Springer, c2013.
Series:Lecture notes in computer science. Lecture notes in bioinformatics ; 7821.
Lecture notes in computer science.
LNCS sublibrary. Bioinformatics.
Online Access:Online version
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Table of Contents:
  • Reconciliation Revisited: Handling Multiple Optima When Reconciling with Duplication, Transfer, and Loss /
  • Mukul S. Bansal, Eric J. Alm, Manolis Kellis
  • SEME: A Fast Mapper of Illumina Sequencing Reads with Statistical Evaluation /
  • Shijian Chen, Anqi Wang, Lei M. Li
  • Dissecting Cancer Heterogeneity with a Probabilistic Genotype-Phenotype Model /
  • Dong-Yeon Cho, Teresa M. Przytycka
  • eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping Data /
  • Itamar Eskin, Farhad Hormozdiari
  • Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models /
  • Ali A. Faruqi, William A. Bryant
  • Detecting Protein Conformational Changes in Interactions via Scaling Known Structures /
  • Fei Guo, Shuai Cheng Li, Wenji Ma
  • IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data /
  • Dan He, Zhanyong Wang, Buhm Han
  • An Optimal Algorithm for Building the Majority Rule Consensus Tree /
  • Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
  • UniNovo : A Universal Tool for de Novo Peptide Sequencing /
  • Kyowon Jeong, Sangtae Kim, Pavel A. Pevzner
  • Efficiently Identifying Significant Associations in Genome-Wide Association Studies /
  • Emrah Kostem, Eleazar Eskin
  • Identification of Ultramodified Proteins Using Top-Down Spectra /
  • Xiaowen Liu, Shawna Hengel, Si Wu
  • Distinguishing between Genomic Regions Bound by Paralogous Transcription Factors /
  • Alina Munteanu, Raluca Gorda╠én
  • Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads /
  • Sergey Nurk, Anton Bankevich, Dmitry Antipov
  • Inferring Intra-tumor Heterogeneity from High-Throughput DNA Sequencing Data /
  • Layla Oesper, Ahmad Mahmoody
  • NP-MuScL: Unsupervised Global Prediction of Interaction Networks from Multiple Data Sources /
  • Kriti Puniyani, Eric P. Xing
  • High Resolution Modeling of Chromatin Interactions /
  • Christopher Reeder, David Gifford
  • A Linear Inside-Outside Algorithm for Correcting Sequencing Errors in Structured RNAs /
  • Vladimir Reinharz, Yann Ponty
  • An Accurate Method for Inferring Relatedness in Large Datasets of Unphased Genotypes via an Embedded Likelihood-Ratio Test /
  • Jesse M. Rodriguez, Serafim Batzoglou
  • Learning Natural Selection from the Site Frequency Spectrum /
  • Roy Ronen, Nitin Udpa, Eran Halperin
  • Considering Unknown Unknowns - Reconstruction of Non-confoundable Causal Relations in Biological Networks /
  • Mohammad Javad Sadeh, Giusi Moffa
  • Inference of Tumor Phylogenies with Improved Somatic Mutation Discovery /
  • Raheleh Salari, Syed Shayon Saleh
  • Abstract: Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches /
  • Evan Senter, Saad Sheikh, Ivan Dotu
  • MethylCRF, an Algorithm for Estimating Absolute Methylation Levels at Single CpG Resolution from Methylation Enrichment and Restriction Enzyme Sequencing Methods /
  • Michael Stevens, Jeffrey B. Cheng
  • Counting Motifs in the Entire Biological Network from Noisy and Incomplete Data /
  • Ngoc Hieu Tran, Kwok Pui Choi, Louxin Zhang
  • Extracting Structural Information from Residual Chemical Shift Anisotropy: Analytic Solutions for Peptide Plane Orientations and Applications to Determine Protein Structure /
  • Chittaranjan Tripathy, Anthony K. Yan
  • Genome-Wide Survival Analysis of Somatic Mutations in Cancer /
  • Fabio Vandin, Alexandra Papoutsaki
  • Spectral Library Generating Function for Assessing Spectrum-Spectrum Match Significance /
  • Mingxun Wang, Nuno Bandeira
  • SPARSE: Quadratic Time Simultaneous Alignment and Folding of RNAs without Sequence-Based Heuristics /
  • Sebastian Will, Christina Schmiedl
  • An Algorithm for Constructing Parsimonious Hybridization Networks with Multiple Phylogenetic Trees /
  • Yufeng Wu
  • Fast and Accurate Calculation of Protein Depth by Euclidean Distance Transform /
  • Dong Xu, Hua Li, Yang Zhang
  • Inference of Spatial Organizations of Chromosomes Using Semi-definite Embedding Approach and Hi-C Data /
  • ZhiZhuo Zhang, Guoliang Li, Kim-Chuan Toh
  • Boosting Prediction Performance of Protein-Protein Interaction Hot Spots by Using Structural Neighborhood Properties /
  • Lei Deng ... [et al.]